[conda] Conda R is not recognized in my linux

[Heonseok Kim]

Dear all,

Hi, I recently installed anaconda and many packages.
python is working quite well with conda python.
but, though i installed R from conda, conda R seems not to be recognized.
When I type which r, it returns /usr/bin/r as below, the "system R"

***@yoda:~$ which r
/usr/bin/r

Below are my conda list
I can find that I installed R.
Because i can't use my conda R, i couldn't use other packages from bioconda.
Does anybody has idea how can i use my conda R as default?

Thanks!


***@yoda:~$ conda list
# packages in environment at /home/heonseokkim/anaconda3:
#
# Name Version Build Channel
_ipyw_jlab_nb_ext_conf 0.1.0 py36he11e457_0
_r-mutex 1.0.0 mro_2
alabaster 0.7.10 py36h306e16b_0
anaconda 5.1.0 py36_2
anaconda-client 1.6.9 py36_0
anaconda-navigator 1.7.0 py36_0
anaconda-project 0.8.2 py36h44fb852_0
asn1crypto 0.24.0 py36_0
astroid 1.6.1 py36_0
astropy 2.0.3 py36h14c3975_0
attrs 17.4.0 py36_0
babel 2.5.3 py36_0
backports 1.0 py36hfa02d7e_1
backports.shutil_get_terminal_size 1.0.0 py36hfea85ff_2
beautifulsoup4 4.6.0 py36h49b8c8c_1
binutils_impl_linux-64 2.28.1 had2808c_3
binutils_linux-64 7.2.0 had2808c_27
bioconductor-edger 3.14.0 0 bioconda
bioconductor-limma 3.28.10 0 bioconda
bitarray 0.8.1 py36h14c3975_1
bkcharts 0.2 py36h735825a_0
blaze 0.11.3 py36h4e06776_0
bleach 2.1.2 py36_0
bokeh 0.12.13 py36h2f9c1c0_0
boto 2.48.0 py36h6e4cd66_1
bottleneck 1.2.1 py36haac1ea0_0
bzip2 1.0.6 h9a117a8_4
ca-certificates 2017.08.26 h1d4fec5_0
cairo 1.14.12 h77bcde2_0
certifi 2018.1.18 py36_0 conda-forge
cffi 1.11.4 py36h9745a5d_0
chardet 3.0.4 py36h0f667ec_1
click 6.7 py36h5253387_0
cloog 0.18.0 0
cloudpickle 0.5.2 py36_1
clyent 1.2.2 py36h7e57e65_1
colorama 0.3.9 py36h489cec4_0
conda 4.4.10 py36_0
conda-build 3.4.1 py36_0
conda-env 2.6.0 h36134e3_1
conda-verify 2.0.0 py36h98955d8_0
contextlib2 0.5.5 py36h6c84a62_0
cryptography 2.1.4 py36hd09be54_0
cufflinks 2.2.1 py36_1 bioconda
curl 7.58.0 h84994c4_0
cycler 0.10.0 py36h93f1223_0
cython 0.27.3 py36h1860423_0
cytoolz 0.9.0 py36h14c3975_0
dask 0.16.1 py36_0
dask-core 0.16.1 py36_0
datashape 0.5.4 py36h3ad6b5c_0
dbus 1.12.2 hc3f9b76_1
decorator 4.2.1 py36_0
distributed 1.20.2 py36_0
docutils 0.14 py36hb0f60f5_0
entrypoints 0.2.3 py36h1aec115_2
et_xmlfile 1.0.1 py36hd6bccc3_0
expat 2.2.5 he0dffb1_0
fastcache 1.0.2 py36h14c3975_2
filelock 2.0.13 py36h646ffb5_0
flask 0.12.2 py36hb24657c_0
flask-cors 3.0.3 py36h2d857d3_0
font-ttf-dejavu-sans-mono 2.37 h6964260_0
font-ttf-inconsolata 2.001 hcb22688_0
font-ttf-source-code-pro 2.030 h7457263_0
font-ttf-ubuntu 0.83 h8b1ccd4_0
fontconfig 2.12.4 h88586e7_1
fonts-continuum 1 0
freetype 2.8 hab7d2ae_1
gcc 4.8.5 7
gcc_impl_linux-64 7.2.0 habb00fd_3
gcc_linux-64 7.2.0 h550dcbe_27
get_terminal_size 1.0.0 haa9412d_0
gevent 1.2.2 py36h2fe25dc_0
gfortran_impl_linux-64 7.2.0 hdf63c60_3
gfortran_linux-64 7.2.0 h550dcbe_27
glib 2.53.6 h5d9569c_2
glob2 0.6 py36he249c77_0
gmp 6.1.2 h6c8ec71_1
gmpy2 2.0.8 py36hc8893dd_2
graphite2 1.3.10 hf63cedd_1
greenlet 0.4.12 py36h2d503a6_0
gst-plugins-base 1.12.4 h33fb286_0
gstreamer 1.12.4 hb53b477_0
gxx_impl_linux-64 7.2.0 hdf63c60_3
gxx_linux-64 7.2.0 h550dcbe_27
h5py 2.7.1 py36h3585f63_0
harfbuzz 1.7.4 hc5b324e_0
hdf5 1.10.1 h9caa474_1
heapdict 1.0.0 py36_2
hisat2 2.1.0 py36pl5.22.0_0 bioconda
html5lib 1.0.1 py36h2f9c1c0_0
icu 58.2 h9c2bf20_1
idna 2.6 py36h82fb2a8_1
imageio 2.2.0 py36he555465_0
imagesize 0.7.1 py36h52d8127_0
intel-openmp 2018.0.0 hc7b2577_8
ipykernel 4.8.0 py36_0
ipython 6.2.1 py36h88c514a_1
ipython_genutils 0.2.0 py36hb52b0d5_0
ipywidgets 7.1.1 py36_0
isl 0.12.2 0
isort 4.2.15 py36had401c0_0
itsdangerous 0.24 py36h93cc618_1
jbig 2.1 hdba287a_0
jdcal 1.3 py36h4c697fb_0
jedi 0.11.1 py36_0
jinja2 2.10 py36ha16c418_0
jpeg 9b h024ee3a_2
jsonschema 2.6.0 py36h006f8b5_0
jupyter 1.0.0 py36_4
jupyter_client 5.2.2 py36_0
jupyter_console 5.2.0 py36he59e554_1
jupyter_core 4.4.0 py36h7c827e3_0
jupyterlab 0.31.5 py36_0
jupyterlab_launcher 0.10.2 py36_0
lazy-object-proxy 1.3.1 py36h10fcdad_0
libcurl 7.58.0 h1ad7b7a_0
libedit 3.1 heed3624_0
libffi 3.2.1 hd88cf55_4
libgcc 7.2.0 h69d50b8_2
libgcc-ng 7.2.0 h7cc24e2_2
libgfortran-ng 7.2.0 h9f7466a_2
libpng 1.6.34 hb9fc6fc_0
libsodium 1.0.15 hf101ebd_0
libssh2 1.8.0 h9cfc8f7_4
libstdcxx-ng 7.2.0 h7a57d05_2
libtiff 4.0.9 h28f6b97_0
libtool 2.4.6 h544aabb_3
libuuid 1.0.3 1 conda-forge
libxcb 1.12 hcd93eb1_4
libxml2 2.9.7 h26e45fe_0
libxslt 1.1.32 h1312cb7_0
llvmlite 0.21.0 py36ha241eea_0
locket 0.2.0 py36h787c0ad_1
lxml 4.1.1 py36hf71bdeb_1
lzo 2.10 h49e0be7_2
markupsafe 1.0 py36hd9260cd_1
matplotlib 2.1.2 py36h0e671d2_0
mccabe 0.6.1 py36h5ad9710_1
mistune 0.8.3 py36_0
mkl 2018.0.1 h19d6760_4
mkl-service 1.1.2 py36h17a0993_4
mpc 1.0.3 hec55b23_5
mpfr 3.1.5 h11a74b3_2
mpmath 1.0.0 py36hfeacd6b_2
mro-base 3.4.3 h1c2f66e_0
mro-basics 3.4.3 0
msgpack-python 0.5.1 py36h6bb024c_0
multipledispatch 0.4.9 py36h41da3fb_0
navigator-updater 0.1.0 py36h14770f7_0
nbconvert 5.3.1 py36hb41ffb7_0
nbformat 4.4.0 py36h31c9010_0
ncurses 6.0 h9df7e31_2
networkx 2.1 py36_0
nltk 3.2.5 py36h7532b22_0
nose 1.3.7 py36hcdf7029_2
notebook 5.4.0 py36_0
numba 0.36.2 np114py36hc6662d5_0
numexpr 2.6.4 py36hc4a3f9a_0
numpy 1.14.0 py36h3dfced4_1
numpydoc 0.7.0 py36h18f165f_0
odo 0.5.1 py36h90ed295_0
olefile 0.45.1 py36_0
openpyxl 2.4.10 py36_0
openssl 1.0.2n hb7f436b_0
packaging 16.8 py36ha668100_1
pandas 0.22.0 py36hf484d3e_0
pandoc 1.19.2.1 hea2e7c5_1
pandocfilters 1.4.2 py36ha6701b7_1
pango 1.41.0 hd475d92_0
parso 0.1.1 py36h35f843b_0
partd 0.3.8 py36h36fd896_0
patchelf 0.9 hf79760b_2
path.py 10.5 py36h55ceabb_0
pathlib2 2.3.0 py36h49efa8e_0
patsy 0.5.0 py36_0
pcre 8.41 hc27e229_1
pep8 1.7.1 py36_0
perl 5.22.0.1 0 conda-forge
pexpect 4.3.1 py36_0
pickleshare 0.7.4 py36h63277f8_0
pillow 5.0.0 py36h3deb7b8_0
pip 9.0.1 py36h6c6f9ce_4
pixman 0.34.0 hceecf20_3
pkginfo 1.4.1 py36h215d178_1
pluggy 0.6.0 py36hb689045_0
ply 3.10 py36hed35086_0
prompt_toolkit 1.0.15 py36h17d85b1_0
psutil 5.4.3 py36h14c3975_0
ptyprocess 0.5.2 py36h69acd42_0
py 1.5.2 py36h29bf505_0
pycodestyle 2.3.1 py36hf609f19_0
pycosat 0.6.3 py36h0a5515d_0
pycparser 2.18 py36hf9f622e_1
pycrypto 2.6.1 py36h14c3975_7
pycurl 7.43.0.1 py36hb7f436b_0
pyflakes 1.6.0 py36h7bd6a15_0
pygments 2.2.0 py36h0d3125c_0
pylint 1.8.2 py36_0
pyodbc 4.0.22 py36hf484d3e_0
pyopenssl 17.5.0 py36h20ba746_0
pyparsing 2.2.0 py36hee85983_1
pyqt 5.6.0 py36h0386399_5
pysocks 1.6.7 py36hd97a5b1_1
pytables 3.4.2 py36h3b5282a_2
pytest 3.3.2 py36_0
python 3.6.4 hc3d631a_1
python-dateutil 2.6.1 py36h88d3b88_1
pytz 2017.3 py36h63b9c63_0
pywavelets 0.5.2 py36he602eb0_0
pyyaml 3.12 py36hafb9ca4_1
pyzmq 16.0.3 py36he2533c7_0
qt 5.6.2 h974d657_12
qtawesome 0.4.4 py36h609ed8c_0
qtconsole 4.3.1 py36h8f73b5b_0
qtpy 1.3.1 py36h3691cc8_0
r 3.4.3 mro343_0 r
r-assertthat 0.2.0 mro343h889e2dd_0
r-backports 1.1.2 mro343h086d26f_0
r-base64enc 0.1_3 mro343h086d26f_0
r-bh 1.65.0_1 mro343h889e2dd_0
r-bindr 0.1 mro343h889e2dd_0
r-bindrcpp 0.2 mro343h599a50d_0
r-bitops 1.0_6 mro343h086d26f_0 r
r-boot 1.3_20 mro343_0
r-broom 0.4.3 mro343h889e2dd_0
r-callr 1.0.0 mro343h889e2dd_0
r-caret 6.0_78 mro343h086d26f_0
r-cellranger 1.1.0 mro343h889e2dd_0
r-checkpoint 0.4.3 mro343_0
r-class 7.3_14 mro343_0
r-cli 1.0.0 mro343h889e2dd_0
r-clipr 0.4.0 mro343h889e2dd_0
r-cluster 2.0.6 mro343_0
r-codetools 0.2_15 mro343_0
r-colorspace 1.3_2 mro343h086d26f_0
r-crayon 1.3.4 mro343h889e2dd_0
r-curl 3.1 mro343_0
r-cvst 0.2_1 mro343h889e2dd_0
r-data.table 1.10.4_3 mro343h086d26f_0
r-dbi 0.7 mro343h889e2dd_0
r-dbplyr 1.1.0 mro343h889e2dd_0
r-ddalpha 1.3.1 mro343h44b0c2a_0
r-deoptimr 1.0_8 mro343h889e2dd_0
r-deployrrserve 9.0.0 mro343_0
r-dichromat 2.0_0 mro343h889e2dd_0
r-digest 0.6.13 mro343h086d26f_0
r-dimred 0.1.0 mro343h889e2dd_0
r-doparallel 1.0.12 mro343_0
r-dplyr 0.7.4 mro343h599a50d_0
r-drr 0.0.2 mro343h889e2dd_0
r-essentials 3.4.3 mro343_0 r
r-evaluate 0.10.1 mro343h889e2dd_0
r-forcats 0.2.0 mro343h889e2dd_0
r-foreach 1.4.5 mro343_0
r-foreign 0.8_69 mro343_0
r-formatr 1.5 mro343h889e2dd_0
r-ggplot2 2.2.1 mro343h889e2dd_0
r-glmnet 2.0_13 mro343h4829c52_0
r-glue 1.2.0 mro343h086d26f_0
r-gower 0.1.2 mro343h086d26f_0
r-gtable 0.2.0 mro343h889e2dd_0
r-haven 1.1.0 mro343h599a50d_0
r-hexbin 1.27.1 mro343h4829c52_0
r-highr 0.6 mro343h889e2dd_0
r-hms 0.4.0 mro343h889e2dd_0
r-htmltools 0.3.6 mro343h599a50d_0
r-htmlwidgets 0.9 mro343h889e2dd_0
r-httpuv 1.3.5 mro343h599a50d_0
r-httr 1.3.1 mro343h889e2dd_0
r-ipred 0.9_6 mro343h086d26f_0
r-irdisplay 0.4.4 mro343h889e2dd_0
r-irkernel 0.8.11 mro343_0
r-iterators 1.0.9 mro343_0
r-jsonlite 1.5 mro343_0
r-kernlab 0.9_25 mro343h44b0c2a_0
r-kernsmooth 2.23_15 mro343_0
r-knitr 1.18 mro343h889e2dd_0
r-labeling 0.3 mro343h889e2dd_0
r-lattice 0.20_35 mro343_0
r-lava 1.5.1 mro343h889e2dd_0
r-lazyeval 0.2.1 mro343h086d26f_0
r-lubridate 1.7.1 mro343h599a50d_0
r-magrittr 1.5 mro343h889e2dd_0
r-maps 3.2.0 mro343h086d26f_0
r-markdown 0.8 mro343h086d26f_0
r-mass 7.3_47 mro343_0
r-matrix 1.2_12 mro343_0
r-mgcv 1.8_22 mro343_0
r-microsoftr 3.4.3.0097 mro343_0
r-mime 0.5 mro343h086d26f_0
r-mnormt 1.5_5 mro343h4829c52_0
r-modelmetrics 1.1.0 mro343h599a50d_0
r-modelr 0.1.1 mro343h889e2dd_0
r-munsell 0.4.3 mro343h889e2dd_0
r-nlme 3.1_131 mro343_0
r-nnet 7.3_12 mro343_0
r-numderiv 2016.8_1 mro343h889e2dd_0
r-openssl 0.9.9 mro343h086d26f_0
r-packrat 0.4.8_1 mro343h889e2dd_0 r
r-pbdzmq 0.2_6 mro343h599a50d_1
r-pillar 1.0.1 mro343h889e2dd_0
r-pkgconfig 2.0.1 mro343h889e2dd_0
r-pki 0.1_5.1 mro343h086d26f_0 r
r-plogr 0.1_1 mro343h889e2dd_0
r-plyr 1.8.4 mro343h599a50d_0
r-png 0.1_7 mro343_0
r-prodlim 1.6.1 mro343h599a50d_0
r-psych 1.7.8 mro343h889e2dd_0
r-purrr 0.2.4 mro343h086d26f_0
r-quantmod 0.4_12 mro343h889e2dd_0
r-r6 2.2.2 mro343_0
r-randomforest 4.6_12 mro343h4829c52_0
r-rbokeh 0.6.3 mro343_0
r-rcolorbrewer 1.1_2 mro343h889e2dd_0
r-rcpp 0.12.14 mro343h599a50d_0
r-rcpproll 0.2.2 mro343h599a50d_0
r-rcurl 1.95_4.9 mro343h086d26f_0 r
r-readr 1.1.1 mro343h599a50d_0
r-readxl 1.0.0 mro343h599a50d_0
r-recipes 0.1.1 mro343h889e2dd_0
r-recommended 3.4.3 mro343_0
r-rematch 1.0.1 mro343h889e2dd_0
r-repr 0.12.0 mro343h889e2dd_0
r-reprex 0.1.1 mro343h889e2dd_0
r-reshape2 1.4.3 mro343h599a50d_0
r-revoioq 8.0.9 mro343_0
r-revomods 11.0.0 mro343_0
r-revoutilsmath 10.0.1 mro343_0
r-rjsonio 1.3_0 mro343h599a50d_0 r
r-rlang 0.1.6 mro343h086d26f_0
r-rmarkdown 1.8 mro343h889e2dd_0
r-robustbase 0.92_8 mro343h4829c52_0
r-rpart 4.1_11 mro343_0
r-rprojroot 1.3_1 mro343h889e2dd_0
r-rsconnect 0.8.5 mro343h889e2dd_0 r
r-rstudioapi 0.7 mro343h889e2dd_0
r-runit 0.4.26 mro343_0
r-rvest 0.3.2 mro343h889e2dd_0
r-scales 0.5.0 mro343h599a50d_0
r-selectr 0.3_1 mro343h889e2dd_0
r-sfsmisc 1.1_1 mro343h889e2dd_0
r-shiny 1.0.5 mro343h889e2dd_0
r-sourcetools 0.1.6 mro343h599a50d_0
r-spatial 7.3_11 mro343_0
r-stringi 1.1.6 mro343h599a50d_0
r-stringr 1.2.0 mro343h889e2dd_0
r-survival 2.41_3 mro343_0
r-tibble 1.4.1 mro343h086d26f_0
r-tidyr 0.7.2 mro343h599a50d_0
r-tidyselect 0.2.3 mro343h599a50d_0
r-tidyverse 1.2.1 mro343h889e2dd_0
r-timedate 3042.101 mro343h889e2dd_0
r-ttr 0.23_2 mro343h4829c52_0
r-utf8 1.1.2 mro343h086d26f_0
r-uuid 0.1_2 mro343h086d26f_0
r-viridislite 0.2.0 mro343h889e2dd_0
r-whisker 0.3_2 mro343h889e2dd_0
r-withr 2.1.1 mro343h889e2dd_0
r-xml2 1.1.1 mro343h599a50d_0
r-xtable 1.8_2 mro343h889e2dd_0
r-xts 0.10_1 mro343h4829c52_0
r-yaml 2.1.16 mro343h086d26f_0
r-zoo 1.8_0 mro343h086d26f_0
readline 7.0 ha6073c6_4
requests 2.18.4 py36he2e5f8d_1
rope 0.10.7 py36h147e2ec_0
ruamel_yaml 0.15.35 py36h14c3975_1
samtools 1.7 1 bioconda
scikit-image 0.13.1 py36h14c3975_1
scikit-learn 0.19.1 py36h7aa7ec6_0
scipy 1.0.0 py36hbf646e7_0
seaborn 0.8.1 py36hfad7ec4_0
send2trash 1.4.2 py36_0
setuptools 38.4.0 py36_0
simplegeneric 0.8.1 py36_2
singledispatch 3.4.0.3 py36h7a266c3_0
sip 4.18.1 py36h51ed4ed_2
six 1.11.0 py36h372c433_1
snowballstemmer 1.2.1 py36h6febd40_0
sortedcollections 0.5.3 py36h3c761f9_0
sortedcontainers 1.5.9 py36_0
sphinx 1.6.6 py36_0
sphinxcontrib 1.0 py36h6d0f590_1
sphinxcontrib-websupport 1.0.1 py36hb5cb234_1
spyder 3.2.6 py36_0
sqlalchemy 1.2.1 py36h14c3975_0
sqlite 3.22.0 h1bed415_0
statsmodels 0.8.0 py36h8533d0b_0
stringtie 1.3.3 py36_3 bioconda
sympy 1.1.1 py36hc6d1c1c_0
tblib 1.3.2 py36h34cf8b6_0
terminado 0.8.1 py36_1
testpath 0.3.1 py36h8cadb63_0
tk 8.6.7 hc745277_3
toolz 0.9.0 py36_0
tornado 4.5.3 py36_0
traitlets 4.3.2 py36h674d592_0
typing 3.6.2 py36h7da032a_0
unicodecsv 0.14.1 py36ha668878_0
unixodbc 2.3.4 hc36303a_1
urllib3 1.22 py36hbe7ace6_0
wcwidth 0.1.7 py36hdf4376a_0
webencodings 0.5.1 py36h800622e_1
werkzeug 0.14.1 py36_0
wheel 0.30.0 py36hfd4bba0_1
widgetsnbextension 3.1.0 py36_0
wrapt 1.10.11 py36h28b7045_0
xlrd 1.1.0 py36h1db9f0c_1
xlsxwriter 1.0.2 py36h3de1aca_0
xlwt 1.3.0 py36h7b00a1f_0
xz 5.2.3 h55aa19d_2
yaml 0.1.7 had09818_2
zeromq 4.2.2 hbedb6e5_2
zict 0.1.3 py36h3a3bf81_0
zlib 1.2.11 ha838bed_2

[Shaun Walbridge]

I think you're probably getting tripped up by the difference between the
littler <http://dirk.eddelbuettel.com/code/littler.html> command and the R
command -- try it capitalized and see if it runs correctly. All of the R
commands are case sensitive on file systems that support it, and "r" is a
separate wrapper that can be optionally installed. If that still doesn't
resolve it, check that "R" exists in ~/anaconda3/bin, and check that
nothing is happening to prevent that bin location from being the first
entry in your PATH after activation.

Post by Heonseok Kim
Dear all,
Hi, I recently installed anaconda and many packages.
python is working quite well with conda python.
but, though i installed R from conda, conda R seems not to be recognized.
When I type which r, it returns /usr/bin/r as below, the "system R"
/usr/bin/r
Below are my conda list
I can find that I installed R.
Because i can't use my conda R, i couldn't use other packages from bioconda.
Does anybody has idea how can i use my conda R as default?
Thanks!
#
# Name Version Build Channel
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bioconductor-edger 3.14.0 0 bioconda
bioconductor-limma 3.28.10 0 bioconda
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boto 2.48.0 py36h6e4cd66_1
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chardet 3.0.4 py36h0f667ec_1
click 6.7 py36h5253387_0
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conda-env 2.6.0 h36134e3_1
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gcc_impl_linux-64 7.2.0 habb00fd_3
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icu 58.2 h9c2bf20_1
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intel-openmp 2018.0.0 hc7b2577_8
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ipython_genutils 0.2.0 py36hb52b0d5_0
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jdcal 1.3 py36h4c697fb_0
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libffi 3.2.1 hd88cf55_4
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libsodium 1.0.15 hf101ebd_0
libssh2 1.8.0 h9cfc8f7_4
libstdcxx-ng 7.2.0 h7a57d05_2
libtiff 4.0.9 h28f6b97_0
libtool 2.4.6 h544aabb_3
libuuid 1.0.3 1 conda-forge
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locket 0.2.0 py36h787c0ad_1
lxml 4.1.1 py36hf71bdeb_1
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mistune 0.8.3 py36_0
mkl 2018.0.1 h19d6760_4
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ncurses 6.0 h9df7e31_2
networkx 2.1 py36_0
nltk 3.2.5 py36h7532b22_0
nose 1.3.7 py36hcdf7029_2
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numba 0.36.2 np114py36hc6662d5_0
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pcre 8.41 hc27e229_1
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pip 9.0.1 py36h6c6f9ce_4
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ply 3.10 py36hed35086_0
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py 1.5.2 py36h29bf505_0
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python 3.6.4 hc3d631a_1
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pytz 2017.3 py36h63b9c63_0
pywavelets 0.5.2 py36he602eb0_0
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pyzmq 16.0.3 py36he2533c7_0
qt 5.6.2 h974d657_12
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qtconsole 4.3.1 py36h8f73b5b_0
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r-curl 3.1 mro343_0
r-cvst 0.2_1 mro343h889e2dd_0
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r-dbi 0.7 mro343h889e2dd_0
r-dbplyr 1.1.0 mro343h889e2dd_0
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r-pbdzmq 0.2_6 mro343h599a50d_1
r-pillar 1.0.1 mro343h889e2dd_0
r-pkgconfig 2.0.1 mro343h889e2dd_0
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r-plogr 0.1_1 mro343h889e2dd_0
r-plyr 1.8.4 mro343h599a50d_0
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r-psych 1.7.8 mro343h889e2dd_0
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r-rcolorbrewer 1.1_2 mro343h889e2dd_0
r-rcpp 0.12.14 mro343h599a50d_0
r-rcpproll 0.2.2 mro343h599a50d_0
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r-readr 1.1.1 mro343h599a50d_0
r-readxl 1.0.0 mro343h599a50d_0
r-recipes 0.1.1 mro343h889e2dd_0
r-recommended 3.4.3 mro343_0
r-rematch 1.0.1 mro343h889e2dd_0
r-repr 0.12.0 mro343h889e2dd_0
r-reprex 0.1.1 mro343h889e2dd_0
r-reshape2 1.4.3 mro343h599a50d_0
r-revoioq 8.0.9 mro343_0
r-revomods 11.0.0 mro343_0
r-revoutilsmath 10.0.1 mro343_0
r-rjsonio 1.3_0 mro343h599a50d_0 r
r-rlang 0.1.6 mro343h086d26f_0
r-rmarkdown 1.8 mro343h889e2dd_0
r-robustbase 0.92_8 mro343h4829c52_0
r-rpart 4.1_11 mro343_0
r-rprojroot 1.3_1 mro343h889e2dd_0
r-rsconnect 0.8.5 mro343h889e2dd_0 r
r-rstudioapi 0.7 mro343h889e2dd_0
r-runit 0.4.26 mro343_0
r-rvest 0.3.2 mro343h889e2dd_0
r-scales 0.5.0 mro343h599a50d_0
r-selectr 0.3_1 mro343h889e2dd_0
r-sfsmisc 1.1_1 mro343h889e2dd_0
r-shiny 1.0.5 mro343h889e2dd_0
r-sourcetools 0.1.6 mro343h599a50d_0
r-spatial 7.3_11 mro343_0
r-stringi 1.1.6 mro343h599a50d_0
r-stringr 1.2.0 mro343h889e2dd_0
r-survival 2.41_3 mro343_0
r-tibble 1.4.1 mro343h086d26f_0
r-tidyr 0.7.2 mro343h599a50d_0
r-tidyselect 0.2.3 mro343h599a50d_0
r-tidyverse 1.2.1 mro343h889e2dd_0
r-timedate 3042.101 mro343h889e2dd_0
r-ttr 0.23_2 mro343h4829c52_0
r-utf8 1.1.2 mro343h086d26f_0
r-uuid 0.1_2 mro343h086d26f_0
r-viridislite 0.2.0 mro343h889e2dd_0
r-whisker 0.3_2 mro343h889e2dd_0
r-withr 2.1.1 mro343h889e2dd_0
r-xml2 1.1.1 mro343h599a50d_0
r-xtable 1.8_2 mro343h889e2dd_0
r-xts 0.10_1 mro343h4829c52_0
r-yaml 2.1.16 mro343h086d26f_0
r-zoo 1.8_0 mro343h086d26f_0
readline 7.0 ha6073c6_4
requests 2.18.4 py36he2e5f8d_1
rope 0.10.7 py36h147e2ec_0
ruamel_yaml 0.15.35 py36h14c3975_1
samtools 1.7 1 bioconda
scikit-image 0.13.1 py36h14c3975_1
scikit-learn 0.19.1 py36h7aa7ec6_0
scipy 1.0.0 py36hbf646e7_0
seaborn 0.8.1 py36hfad7ec4_0
send2trash 1.4.2 py36_0
setuptools 38.4.0 py36_0
simplegeneric 0.8.1 py36_2
singledispatch 3.4.0.3 py36h7a266c3_0
sip 4.18.1 py36h51ed4ed_2
six 1.11.0 py36h372c433_1
snowballstemmer 1.2.1 py36h6febd40_0
sortedcollections 0.5.3 py36h3c761f9_0
sortedcontainers 1.5.9 py36_0
sphinx 1.6.6 py36_0
sphinxcontrib 1.0 py36h6d0f590_1
sphinxcontrib-websupport 1.0.1 py36hb5cb234_1
spyder 3.2.6 py36_0
sqlalchemy 1.2.1 py36h14c3975_0
sqlite 3.22.0 h1bed415_0
statsmodels 0.8.0 py36h8533d0b_0
stringtie 1.3.3 py36_3 bioconda
sympy 1.1.1 py36hc6d1c1c_0
tblib 1.3.2 py36h34cf8b6_0
terminado 0.8.1 py36_1
testpath 0.3.1 py36h8cadb63_0
tk 8.6.7 hc745277_3
toolz 0.9.0 py36_0
tornado 4.5.3 py36_0
traitlets 4.3.2 py36h674d592_0
typing 3.6.2 py36h7da032a_0
unicodecsv 0.14.1 py36ha668878_0
unixodbc 2.3.4 hc36303a_1
urllib3 1.22 py36hbe7ace6_0
wcwidth 0.1.7 py36hdf4376a_0
webencodings 0.5.1 py36h800622e_1
werkzeug 0.14.1 py36_0
wheel 0.30.0 py36hfd4bba0_1
widgetsnbextension 3.1.0 py36_0
wrapt 1.10.11 py36h28b7045_0
xlrd 1.1.0 py36h1db9f0c_1
xlsxwriter 1.0.2 py36h3de1aca_0
xlwt 1.3.0 py36h7b00a1f_0
xz 5.2.3 h55aa19d_2
yaml 0.1.7 had09818_2
zeromq 4.2.2 hbedb6e5_2
zict 0.1.3 py36h3a3bf81_0
zlib 1.2.11 ha838bed_2
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[Heonseok Kim]

Dear Shaun,

Thank you very much for your explanation.
I found which R also gives same message and I could not find R in
~/anaconda3/bin
I could find python and perl at ~/anaconda3/bin

I entered conda install -c r r
for my R installation.

But something seems went wrong becuase i can't find my R in ~/anaconda3/bin
Could you give me any suggestions for this?

Best wishes,
Heon Seok

***@yoda:~$ which R
/usr/bin/R

Post by Shaun Walbridge
I think you're probably getting tripped up by the difference between the
littler <http://dirk.eddelbuettel.com/code/littler.html> command and the
R command -- try it capitalized and see if it runs correctly. All of the R
commands are case sensitive on file systems that support it, and "r" is a
separate wrapper that can be optionally installed. If that still doesn't
resolve it, check that "R" exists in ~/anaconda3/bin, and check that
nothing is happening to prevent that bin location from being the first
entry in your PATH after activation.

Post by Heonseok Kim
Dear all,
Hi, I recently installed anaconda and many packages.
python is working quite well with conda python.
but, though i installed R from conda, conda R seems not to be recognized.
When I type which r, it returns /usr/bin/r as below, the "system R"
/usr/bin/r
Below are my conda list
I can find that I installed R.
Because i can't use my conda R, i couldn't use other packages from bioconda.
Does anybody has idea how can i use my conda R as default?
Thanks!
#
# Name Version Build Channel
_ipyw_jlab_nb_ext_conf 0.1.0 py36he11e457_0
_r-mutex 1.0.0 mro_2
alabaster 0.7.10 py36h306e16b_0
anaconda 5.1.0 py36_2
anaconda-client 1.6.9 py36_0
anaconda-navigator 1.7.0 py36_0
anaconda-project 0.8.2 py36h44fb852_0
asn1crypto 0.24.0 py36_0
astroid 1.6.1 py36_0
astropy 2.0.3 py36h14c3975_0
attrs 17.4.0 py36_0
babel 2.5.3 py36_0
backports 1.0 py36hfa02d7e_1
backports.shutil_get_terminal_size 1.0.0 py36hfea85ff_2
beautifulsoup4 4.6.0 py36h49b8c8c_1
binutils_impl_linux-64 2.28.1 had2808c_3
binutils_linux-64 7.2.0 had2808c_27
bioconductor-edger 3.14.0 0 bioconda
bioconductor-limma 3.28.10 0 bioconda
bitarray 0.8.1 py36h14c3975_1
bkcharts 0.2 py36h735825a_0
blaze 0.11.3 py36h4e06776_0
bleach 2.1.2 py36_0
bokeh 0.12.13 py36h2f9c1c0_0
boto 2.48.0 py36h6e4cd66_1
bottleneck 1.2.1 py36haac1ea0_0
bzip2 1.0.6 h9a117a8_4
ca-certificates 2017.08.26 h1d4fec5_0
cairo 1.14.12 h77bcde2_0
certifi 2018.1.18 py36_0 conda-forge
cffi 1.11.4 py36h9745a5d_0
chardet 3.0.4 py36h0f667ec_1
click 6.7 py36h5253387_0
cloog 0.18.0 0
cloudpickle 0.5.2 py36_1
clyent 1.2.2 py36h7e57e65_1
colorama 0.3.9 py36h489cec4_0
conda 4.4.10 py36_0
conda-build 3.4.1 py36_0
conda-env 2.6.0 h36134e3_1
conda-verify 2.0.0 py36h98955d8_0
contextlib2 0.5.5 py36h6c84a62_0
cryptography 2.1.4 py36hd09be54_0
cufflinks 2.2.1 py36_1 bioconda
curl 7.58.0 h84994c4_0
cycler 0.10.0 py36h93f1223_0
cython 0.27.3 py36h1860423_0
cytoolz 0.9.0 py36h14c3975_0
dask 0.16.1 py36_0
dask-core 0.16.1 py36_0
datashape 0.5.4 py36h3ad6b5c_0
dbus 1.12.2 hc3f9b76_1
decorator 4.2.1 py36_0
distributed 1.20.2 py36_0
docutils 0.14 py36hb0f60f5_0
entrypoints 0.2.3 py36h1aec115_2
et_xmlfile 1.0.1 py36hd6bccc3_0
expat 2.2.5 he0dffb1_0
fastcache 1.0.2 py36h14c3975_2
filelock 2.0.13 py36h646ffb5_0
flask 0.12.2 py36hb24657c_0
flask-cors 3.0.3 py36h2d857d3_0
font-ttf-dejavu-sans-mono 2.37 h6964260_0
font-ttf-inconsolata 2.001 hcb22688_0
font-ttf-source-code-pro 2.030 h7457263_0
font-ttf-ubuntu 0.83 h8b1ccd4_0
fontconfig 2.12.4 h88586e7_1
fonts-continuum 1 0
freetype 2.8 hab7d2ae_1
gcc 4.8.5 7
gcc_impl_linux-64 7.2.0 habb00fd_3
gcc_linux-64 7.2.0 h550dcbe_27
get_terminal_size 1.0.0 haa9412d_0
gevent 1.2.2 py36h2fe25dc_0
gfortran_impl_linux-64 7.2.0 hdf63c60_3
gfortran_linux-64 7.2.0 h550dcbe_27
glib 2.53.6 h5d9569c_2
glob2 0.6 py36he249c77_0
gmp 6.1.2 h6c8ec71_1
gmpy2 2.0.8 py36hc8893dd_2
graphite2 1.3.10 hf63cedd_1
greenlet 0.4.12 py36h2d503a6_0
gst-plugins-base 1.12.4 h33fb286_0
gstreamer 1.12.4 hb53b477_0
gxx_impl_linux-64 7.2.0 hdf63c60_3
gxx_linux-64 7.2.0 h550dcbe_27
h5py 2.7.1 py36h3585f63_0
harfbuzz 1.7.4 hc5b324e_0
hdf5 1.10.1 h9caa474_1
heapdict 1.0.0 py36_2
hisat2 2.1.0 py36pl5.22.0_0 bioconda
html5lib 1.0.1 py36h2f9c1c0_0
icu 58.2 h9c2bf20_1
idna 2.6 py36h82fb2a8_1
imageio 2.2.0 py36he555465_0
imagesize 0.7.1 py36h52d8127_0
intel-openmp 2018.0.0 hc7b2577_8
ipykernel 4.8.0 py36_0
ipython 6.2.1 py36h88c514a_1
ipython_genutils 0.2.0 py36hb52b0d5_0
ipywidgets 7.1.1 py36_0
isl 0.12.2 0
isort 4.2.15 py36had401c0_0
itsdangerous 0.24 py36h93cc618_1
jbig 2.1 hdba287a_0
jdcal 1.3 py36h4c697fb_0
jedi 0.11.1 py36_0
jinja2 2.10 py36ha16c418_0
jpeg 9b h024ee3a_2
jsonschema 2.6.0 py36h006f8b5_0
jupyter 1.0.0 py36_4
jupyter_client 5.2.2 py36_0
jupyter_console 5.2.0 py36he59e554_1
jupyter_core 4.4.0 py36h7c827e3_0
jupyterlab 0.31.5 py36_0
jupyterlab_launcher 0.10.2 py36_0
lazy-object-proxy 1.3.1 py36h10fcdad_0
libcurl 7.58.0 h1ad7b7a_0
libedit 3.1 heed3624_0
libffi 3.2.1 hd88cf55_4
libgcc 7.2.0 h69d50b8_2
libgcc-ng 7.2.0 h7cc24e2_2
libgfortran-ng 7.2.0 h9f7466a_2
libpng 1.6.34 hb9fc6fc_0
libsodium 1.0.15 hf101ebd_0
libssh2 1.8.0 h9cfc8f7_4
libstdcxx-ng 7.2.0 h7a57d05_2
libtiff 4.0.9 h28f6b97_0
libtool 2.4.6 h544aabb_3
libuuid 1.0.3 1 conda-forge
libxcb 1.12 hcd93eb1_4
libxml2 2.9.7 h26e45fe_0
libxslt 1.1.32 h1312cb7_0
llvmlite 0.21.0 py36ha241eea_0
locket 0.2.0 py36h787c0ad_1
lxml 4.1.1 py36hf71bdeb_1
lzo 2.10 h49e0be7_2
markupsafe 1.0 py36hd9260cd_1
matplotlib 2.1.2 py36h0e671d2_0
mccabe 0.6.1 py36h5ad9710_1
mistune 0.8.3 py36_0
mkl 2018.0.1 h19d6760_4
mkl-service 1.1.2 py36h17a0993_4
mpc 1.0.3 hec55b23_5
mpfr 3.1.5 h11a74b3_2
mpmath 1.0.0 py36hfeacd6b_2
mro-base 3.4.3 h1c2f66e_0
mro-basics 3.4.3 0
msgpack-python 0.5.1 py36h6bb024c_0
multipledispatch 0.4.9 py36h41da3fb_0
navigator-updater 0.1.0 py36h14770f7_0
nbconvert 5.3.1 py36hb41ffb7_0
nbformat 4.4.0 py36h31c9010_0
ncurses 6.0 h9df7e31_2
networkx 2.1 py36_0
nltk 3.2.5 py36h7532b22_0
nose 1.3.7 py36hcdf7029_2
notebook 5.4.0 py36_0
numba 0.36.2 np114py36hc6662d5_0
numexpr 2.6.4 py36hc4a3f9a_0
numpy 1.14.0 py36h3dfced4_1
numpydoc 0.7.0 py36h18f165f_0
odo 0.5.1 py36h90ed295_0
olefile 0.45.1 py36_0
openpyxl 2.4.10 py36_0
openssl 1.0.2n hb7f436b_0
packaging 16.8 py36ha668100_1
pandas 0.22.0 py36hf484d3e_0
pandoc 1.19.2.1 hea2e7c5_1
pandocfilters 1.4.2 py36ha6701b7_1
pango 1.41.0 hd475d92_0
parso 0.1.1 py36h35f843b_0
partd 0.3.8 py36h36fd896_0
patchelf 0.9 hf79760b_2
path.py 10.5 py36h55ceabb_0
pathlib2 2.3.0 py36h49efa8e_0
patsy 0.5.0 py36_0
pcre 8.41 hc27e229_1
pep8 1.7.1 py36_0
perl 5.22.0.1 0 conda-forge
pexpect 4.3.1 py36_0
pickleshare 0.7.4 py36h63277f8_0
pillow 5.0.0 py36h3deb7b8_0
pip 9.0.1 py36h6c6f9ce_4
pixman 0.34.0 hceecf20_3
pkginfo 1.4.1 py36h215d178_1
pluggy 0.6.0 py36hb689045_0
ply 3.10 py36hed35086_0
prompt_toolkit 1.0.15 py36h17d85b1_0
psutil 5.4.3 py36h14c3975_0
ptyprocess 0.5.2 py36h69acd42_0
py 1.5.2 py36h29bf505_0
pycodestyle 2.3.1 py36hf609f19_0
pycosat 0.6.3 py36h0a5515d_0
pycparser 2.18 py36hf9f622e_1
pycrypto 2.6.1 py36h14c3975_7
pycurl 7.43.0.1 py36hb7f436b_0
pyflakes 1.6.0 py36h7bd6a15_0
pygments 2.2.0 py36h0d3125c_0
pylint 1.8.2 py36_0
pyodbc 4.0.22 py36hf484d3e_0
pyopenssl 17.5.0 py36h20ba746_0
pyparsing 2.2.0 py36hee85983_1
pyqt 5.6.0 py36h0386399_5
pysocks 1.6.7 py36hd97a5b1_1
pytables 3.4.2 py36h3b5282a_2
pytest 3.3.2 py36_0
python 3.6.4 hc3d631a_1
python-dateutil 2.6.1 py36h88d3b88_1
pytz 2017.3 py36h63b9c63_0
pywavelets 0.5.2 py36he602eb0_0
pyyaml 3.12 py36hafb9ca4_1
pyzmq 16.0.3 py36he2533c7_0
qt 5.6.2 h974d657_12
qtawesome 0.4.4 py36h609ed8c_0
qtconsole 4.3.1 py36h8f73b5b_0
qtpy 1.3.1 py36h3691cc8_0
r 3.4.3 mro343_0 r
r-assertthat 0.2.0 mro343h889e2dd_0
r-backports 1.1.2 mro343h086d26f_0
r-base64enc 0.1_3 mro343h086d26f_0
r-bh 1.65.0_1 mro343h889e2dd_0
r-bindr 0.1 mro343h889e2dd_0
r-bindrcpp 0.2 mro343h599a50d_0
r-bitops 1.0_6 mro343h086d26f_0 r
r-boot 1.3_20 mro343_0
r-broom 0.4.3 mro343h889e2dd_0
r-callr 1.0.0 mro343h889e2dd_0
r-caret 6.0_78 mro343h086d26f_0
r-cellranger 1.1.0 mro343h889e2dd_0
r-checkpoint 0.4.3 mro343_0
r-class 7.3_14 mro343_0
r-cli 1.0.0 mro343h889e2dd_0
r-clipr 0.4.0 mro343h889e2dd_0
r-cluster 2.0.6 mro343_0
r-codetools 0.2_15 mro343_0
r-colorspace 1.3_2 mro343h086d26f_0
r-crayon 1.3.4 mro343h889e2dd_0
r-curl 3.1 mro343_0
r-cvst 0.2_1 mro343h889e2dd_0
r-data.table 1.10.4_3 mro343h086d26f_0
r-dbi 0.7 mro343h889e2dd_0
r-dbplyr 1.1.0 mro343h889e2dd_0
r-ddalpha 1.3.1 mro343h44b0c2a_0
r-deoptimr 1.0_8 mro343h889e2dd_0
r-deployrrserve 9.0.0 mro343_0
r-dichromat 2.0_0 mro343h889e2dd_0
r-digest 0.6.13 mro343h086d26f_0
r-dimred 0.1.0 mro343h889e2dd_0
r-doparallel 1.0.12 mro343_0
r-dplyr 0.7.4 mro343h599a50d_0
r-drr 0.0.2 mro343h889e2dd_0
r-essentials 3.4.3 mro343_0 r
r-evaluate 0.10.1 mro343h889e2dd_0
r-forcats 0.2.0 mro343h889e2dd_0
r-foreach 1.4.5 mro343_0
r-foreign 0.8_69 mro343_0
r-formatr 1.5 mro343h889e2dd_0
r-ggplot2 2.2.1 mro343h889e2dd_0
r-glmnet 2.0_13 mro343h4829c52_0
r-glue 1.2.0 mro343h086d26f_0
r-gower 0.1.2 mro343h086d26f_0
r-gtable 0.2.0 mro343h889e2dd_0
r-haven 1.1.0 mro343h599a50d_0
r-hexbin 1.27.1 mro343h4829c52_0
r-highr 0.6 mro343h889e2dd_0
r-hms 0.4.0 mro343h889e2dd_0
r-htmltools 0.3.6 mro343h599a50d_0
r-htmlwidgets 0.9 mro343h889e2dd_0
r-httpuv 1.3.5 mro343h599a50d_0
r-httr 1.3.1 mro343h889e2dd_0
r-ipred 0.9_6 mro343h086d26f_0
r-irdisplay 0.4.4 mro343h889e2dd_0
r-irkernel 0.8.11 mro343_0
r-iterators 1.0.9 mro343_0
r-jsonlite 1.5 mro343_0
r-kernlab 0.9_25 mro343h44b0c2a_0
r-kernsmooth 2.23_15 mro343_0
r-knitr 1.18 mro343h889e2dd_0
r-labeling 0.3 mro343h889e2dd_0
r-lattice 0.20_35 mro343_0
r-lava 1.5.1 mro343h889e2dd_0
r-lazyeval 0.2.1 mro343h086d26f_0
r-lubridate 1.7.1 mro343h599a50d_0
r-magrittr 1.5 mro343h889e2dd_0
r-maps 3.2.0 mro343h086d26f_0
r-markdown 0.8 mro343h086d26f_0
r-mass 7.3_47 mro343_0
r-matrix 1.2_12 mro343_0
r-mgcv 1.8_22 mro343_0
r-microsoftr 3.4.3.0097 mro343_0
r-mime 0.5 mro343h086d26f_0
r-mnormt 1.5_5 mro343h4829c52_0
r-modelmetrics 1.1.0 mro343h599a50d_0
r-modelr 0.1.1 mro343h889e2dd_0
r-munsell 0.4.3 mro343h889e2dd_0
r-nlme 3.1_131 mro343_0
r-nnet 7.3_12 mro343_0
r-numderiv 2016.8_1 mro343h889e2dd_0
r-openssl 0.9.9 mro343h086d26f_0
r-packrat 0.4.8_1 mro343h889e2dd_0 r
r-pbdzmq 0.2_6 mro343h599a50d_1
r-pillar 1.0.1 mro343h889e2dd_0
r-pkgconfig 2.0.1 mro343h889e2dd_0
r-pki 0.1_5.1 mro343h086d26f_0 r
r-plogr 0.1_1 mro343h889e2dd_0
r-plyr 1.8.4 mro343h599a50d_0
r-png 0.1_7 mro343_0
r-prodlim 1.6.1 mro343h599a50d_0
r-psych 1.7.8 mro343h889e2dd_0
r-purrr 0.2.4 mro343h086d26f_0
r-quantmod 0.4_12 mro343h889e2dd_0
r-r6 2.2.2 mro343_0
r-randomforest 4.6_12 mro343h4829c52_0
r-rbokeh 0.6.3 mro343_0
r-rcolorbrewer 1.1_2 mro343h889e2dd_0
r-rcpp 0.12.14 mro343h599a50d_0
r-rcpproll 0.2.2 mro343h599a50d_0
r-rcurl 1.95_4.9 mro343h086d26f_0 r
r-readr 1.1.1 mro343h599a50d_0
r-readxl 1.0.0 mro343h599a50d_0
r-recipes 0.1.1 mro343h889e2dd_0
r-recommended 3.4.3 mro343_0
r-rematch 1.0.1 mro343h889e2dd_0
r-repr 0.12.0 mro343h889e2dd_0
r-reprex 0.1.1 mro343h889e2dd_0
r-reshape2 1.4.3 mro343h599a50d_0
r-revoioq 8.0.9 mro343_0
r-revomods 11.0.0 mro343_0
r-revoutilsmath 10.0.1 mro343_0
r-rjsonio 1.3_0 mro343h599a50d_0 r
r-rlang 0.1.6 mro343h086d26f_0
r-rmarkdown 1.8 mro343h889e2dd_0
r-robustbase 0.92_8 mro343h4829c52_0
r-rpart 4.1_11 mro343_0
r-rprojroot 1.3_1 mro343h889e2dd_0
r-rsconnect 0.8.5 mro343h889e2dd_0 r
r-rstudioapi 0.7 mro343h889e2dd_0
r-runit 0.4.26 mro343_0
r-rvest 0.3.2 mro343h889e2dd_0
r-scales 0.5.0 mro343h599a50d_0
r-selectr 0.3_1 mro343h889e2dd_0
r-sfsmisc 1.1_1 mro343h889e2dd_0
r-shiny 1.0.5 mro343h889e2dd_0
r-sourcetools 0.1.6 mro343h599a50d_0
r-spatial 7.3_11 mro343_0
r-stringi 1.1.6 mro343h599a50d_0
r-stringr 1.2.0 mro343h889e2dd_0
r-survival 2.41_3 mro343_0
r-tibble 1.4.1 mro343h086d26f_0
r-tidyr 0.7.2 mro343h599a50d_0
r-tidyselect 0.2.3 mro343h599a50d_0
r-tidyverse 1.2.1 mro343h889e2dd_0
r-timedate 3042.101 mro343h889e2dd_0
r-ttr 0.23_2 mro343h4829c52_0
r-utf8 1.1.2 mro343h086d26f_0
r-uuid 0.1_2 mro343h086d26f_0
r-viridislite 0.2.0 mro343h889e2dd_0
r-whisker 0.3_2 mro343h889e2dd_0
r-withr 2.1.1 mro343h889e2dd_0
r-xml2 1.1.1 mro343h599a50d_0
r-xtable 1.8_2 mro343h889e2dd_0
r-xts 0.10_1 mro343h4829c52_0
r-yaml 2.1.16 mro343h086d26f_0
r-zoo 1.8_0 mro343h086d26f_0
readline 7.0 ha6073c6_4
requests 2.18.4 py36he2e5f8d_1
rope 0.10.7 py36h147e2ec_0
ruamel_yaml 0.15.35 py36h14c3975_1
samtools 1.7 1 bioconda
scikit-image 0.13.1 py36h14c3975_1
scikit-learn 0.19.1 py36h7aa7ec6_0
scipy 1.0.0 py36hbf646e7_0
seaborn 0.8.1 py36hfad7ec4_0
send2trash 1.4.2 py36_0
setuptools 38.4.0 py36_0
simplegeneric 0.8.1 py36_2
singledispatch 3.4.0.3 py36h7a266c3_0
sip 4.18.1 py36h51ed4ed_2
six 1.11.0 py36h372c433_1
snowballstemmer 1.2.1 py36h6febd40_0
sortedcollections 0.5.3 py36h3c761f9_0
sortedcontainers 1.5.9 py36_0
sphinx 1.6.6 py36_0
sphinxcontrib 1.0 py36h6d0f590_1
sphinxcontrib-websupport 1.0.1 py36hb5cb234_1
spyder 3.2.6 py36_0
sqlalchemy 1.2.1 py36h14c3975_0
sqlite 3.22.0 h1bed415_0
statsmodels 0.8.0 py36h8533d0b_0
stringtie 1.3.3 py36_3 bioconda
sympy 1.1.1 py36hc6d1c1c_0
tblib 1.3.2 py36h34cf8b6_0
terminado 0.8.1 py36_1
testpath 0.3.1 py36h8cadb63_0
tk 8.6.7 hc745277_3
toolz 0.9.0 py36_0
tornado 4.5.3 py36_0
traitlets 4.3.2 py36h674d592_0
typing 3.6.2 py36h7da032a_0
unicodecsv 0.14.1 py36ha668878_0
unixodbc 2.3.4 hc36303a_1
urllib3 1.22 py36hbe7ace6_0
wcwidth 0.1.7 py36hdf4376a_0
webencodings 0.5.1 py36h800622e_1
werkzeug 0.14.1 py36_0
wheel 0.30.0 py36hfd4bba0_1
widgetsnbextension 3.1.0 py36_0
wrapt 1.10.11 py36h28b7045_0
xlrd 1.1.0 py36h1db9f0c_1
xlsxwriter 1.0.2 py36h3de1aca_0
xlwt 1.3.0 py36h7b00a1f_0
xz 5.2.3 h55aa19d_2
yaml 0.1.7 had09818_2
zeromq 4.2.2 hbedb6e5_2
zict 0.1.3 py36h3a3bf81_0
zlib 1.2.11 ha838bed_2
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